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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-04 12:04:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mdfw2010l05.y1 Mdfw Malus domestica cDNA clone Mdfw2010l05 5', mRNA sequence.
CN491350.1:80-99
AGAAATGGTATTTGGGTGGGACAAGAGGGG80TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGCACTCTCAGCTGAACTG
Mdfrt3037m11.y4 Mdfrt Malus domestica cDNA clone Mdfrt3037m11 5', mRNA sequence.
CO867775.1:124-143
AGAAATGGTATTTGGGTGGGACAAGAGGGG124TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGCACTCTCAGCTGAACTG
Mdfrt3040g20.y3 Mdfrt Malus domestica cDNA clone Mdfrt3040g20 5', mRNA sequence.
CO868168.1:39-58
AGAAATGGTATTTGGGTGGGACAAGAGGGG39TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGCACTCTCAGCTGAACTG
Mdfb8005E17.g1 Apple_EST_Mdfb Malus domestica cDNA similar to ref|NP_568154.1| chalcone-flavanone isomerase family [Arabidopsis thaliana] ref|NP_850770.1| chalcone-flavanone isomerase family [Arabidop
DT001537.1:434-453
AGAAATGGTATTTGGGTGGGACAAGAGGGG434TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGCACTCTCAGCTGAACTG
000501AEPA002139HT (AEPA) Pinkie expanding leaf Malus domestica cDNA clone AEPA002139, mRNA sequence.
EB110971.1:243-262
AGAAATGGTATTTGGGTGGGACAAGAGGGG243TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGCACTCTCAGCTGAACTG
000530AEPA004074HT (AEPA) Pinkie expanding leaf Malus domestica cDNA clone AEPA004074, mRNA sequence.
EB111376.1:243-262
AGAAATGGTATTTGGGTGGGACAAGAGGGG243TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGCACTCTCAGCTGAACTG
Mdfwj2075E24.g1 Apple_EST_Mdfwj Malus domestica cDNA 5' similar to ref|NP_568154.1| chalcone-flavanone isomerase family [Arabidopsis thaliana] ref|NP_850770.1| chalcone-flavanone isomerase family [Ara
GO505599.1:588-607
AGAAATGGTATTTGGGTGGGACAAGAGGGG588TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGCACTCTCA
Mdfbg8013B22.g1 Apple_EST_Mdfbg Malus hybrid rootstock cDNA 5' similar to ref|NP_568154.1| chalcone-flavanone isomerase family [Arabidopsis thaliana] ref|NP_850770.1| chalcone-flavanone isomerase fami
GO517049.1:665-684
AGAAATGGTATTTGGGTGGGACAAGAGGGG665TGTCTCCTTCGACCATCTCCTCCCTGGGCCACGCAC
Mdfrs3141F20.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to ref|NP_568154.1| chalcone-flavanone isomerase family [Arabidopsis thaliana] ref|NP_850770.1| chalcone-flavanone isomerase family [Ara
GO519521.1:552-571
AGAAATGGTATTTGGGTGGGACAAGAGGGG552TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGCACTCTCAGCTGAACTG
Mdfrs3142K23.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to ref|NP_568154.1| chalcone-flavanone isomerase family [Arabidopsis thaliana] ref|NP_850770.1| chalcone-flavanone isomerase family [Ara
GO520003.1:615-634
AGAAATGGTATTTGGGTGGGACAAGAGGGG615TGTCTCCTTCGACCATCTCCTCCCTGGC
Mdfrjg3501K15.g2 Apple_EST_Mdfrjg Malus domestica cDNA 5' similar to ref|NP_568154.1| chalcone-flavanone isomerase family [Arabidopsis thaliana] ref|NP_850770.1| chalcone-flavanone isomerase family [A
GO539995.1:649-668
AGAAATGGTATTTGGGTGGGACAAGAGGGG649TGTCTCCTTCGACCATCTCCTC
Pyrus pyrifolia mRNA, clone: NLE1_03_57, 5' end sequence, expressed in leaf bud.
HX766001.1:668-687
AGAAATGGTATTTGGGTGGGACAAGAGGGG668TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGCACTCTCAGCTGAACTG
Pyrus pyrifolia mRNA, clone: NLE2_15_33, 5' end sequence, expressed in leaf.
HX767923.1:627-646
AGAAATGGTATTTGGGTGGGACAAGAGGGG627TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGCACTCTCAGCTGAACTG
TSA: Pyrus communis mRNA, contig: lc2427.
FX611014.1:467-486
AGAAATGGTATTTGGGTGGGACAAGAGGGG467TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGCACTCTCAGCTGAACTG
TSA: Pyrus communis mRNA, contig: lc15146.
FX623712.1:342-361
AGAAATGGTATTTGGGTGGGACAAGAGGGG342TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGTACTCTCAGCTGAACTG
TSA: Pyrus x bretschneideri Unigene69711_XinShao mRNA sequence.
JR656166.1:452-471
AGAAATGGTATTTGGGTGGGACAAGAGGGG452TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGCACTCTCAGCTGAACTG
TSA: Pyrus x bretschneideri Unigene85981_XinShao mRNA sequence.
JR669927.1:2-21
G2TGTCTCCTTCGACCATCTCCTCCTTGGCCAACGCTCTCTCGGGTGAGTTG
Pyrus pyrifolia chalcone isomerase (CHI3) mRNA, complete cds.
JN870842.1:572-591
AGAAATGGTATTTGGGTGGGACAAGAGGGG572TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGCACTCTCAGCTGAACTG
Avena insularis genome assembly, chromosome: 6C.
OU342343.1:242840495-242840514
GCCCCTCTCCGGGTTCGCCGTTGTCGACTG242840495TGTCTCCTTCGACCATCTCCGACTGTCAGCAAGCCCCCAGGTACCCTCTG
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:5752774-5752793
AGAAATGGTATTTGGGTGGGACAAGAGGGG5752774TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGCACTCTCAGCTGAACTG
Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:5948938-5948957
AGAAATGGTATTTGGGTGGGACAAGAGGGG5948938TGTCTCCTTCGACCATCTCCTCCCTGGCCAACACACTCTCAGCTGAACTG
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:4506110-4506129
AGAAATGGTATTTGGGTGGGACAAGAGGGG4506110TGTCTCCTTCGACCATCTCCTCCCTGGCCAACGCACTCTCAGCTGAACTG
Pimpla rufipes genome assembly, chromosome: 7.
OZ010636.1:7824453-7824472
AAATTTAAACATGAGGTACCAATCGGTTAC7824453TGTCTCCTTCGACCATCTCCCGTTCCGTTGATTCGAAATGGGGATATAAA
Pimpla rufipes genome assembly, chromosome: 7.
OZ010636.1:7824849-7824868
AAATTTAAACATGAGGTACCAATTGGTTAC7824849TGTCTCCTTCGACCATCTCCCGTTCCGTCGATTCGAAATGGGGATATAAA
Mdlv4-4046n12.y1 Mdlv4 Malus domestica cDNA clone Mdlv4-4046n12 5', mRNA sequence.
CX023241.1:235-254
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA235GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
000304AVBB007196HT (AVBB) Royal Gala young shoot Malus domestica cDNA clone AVBB007196, mRNA sequence.
EB106959.1:132-151
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA132GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
020801AVBC009538HT (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC009538, mRNA sequence.
EB131097.1:200-219
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA200GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Mdfrfu3511N20_e5698.g1 Apple_EST_Mdfrfu Malus domestica cDNA 5' similar to ref|NP_568154.1| chalcone-flavanone isomerase family [Arabidopsis thaliana] ref|NP_850770.1| chalcone-flavanone isomerase fam
GO538246.1:214-233
CAGTTCAGCTGAAAGTGCGTTGGCCAGGGA214GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Mdfrfu3514I09_e5997.g1 Apple_EST_Mdfrfu Malus domestica cDNA 5' similar to ref|NP_568154.1| chalcone-flavanone isomerase family [Arabidopsis thaliana] ref|NP_850770.1| chalcone-flavanone isomerase fam
GO538388.1:213-232
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA213GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Mdfrjg3507D15_e7399.g1 Apple_EST_Mdfrjg Malus domestica cDNA 5' similar to ref|NP_568154.1| chalcone-flavanone isomerase family [Arabidopsis thaliana] ref|NP_850770.1| chalcone-flavanone isomerase fam
GO542667.1:213-232
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA213GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Mdfwj2075L01_e22201.g1 Apple_EST_Mdfwj Malus domestica cDNA 5' similar to ref|NP_568154.1| chalcone-flavanone isomerase family [Arabidopsis thaliana] ref|NP_850770.1| chalcone-flavanone isomerase fami
GO561082.1:214-233
CAGTTCAGCTGAAAGTGCGTTGGCCAGGGA214GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Mdfwj2080I01_e22661.g1 Apple_EST_Mdfwj Malus domestica cDNA 5' similar to ref|NP_568154.1| chalcone-flavanone isomerase family [Arabidopsis thaliana] ref|NP_850770.1| chalcone-flavanone isomerase fami
GO561275.1:268-287
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA268GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Pyrus pyrifolia mRNA, clone: NLE1_03_57, 3' end sequence, expressed in leaf bud.
HX744490.1:198-217
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA198GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Pyrus pyrifolia mRNA, clone: NFW2_19_92, 5' end sequence, expressed in flower bud.
HX763534.1:199-218
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA199GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:28278756-28278775
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA28278756GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:28084178-28084197
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA28084178GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:27855824-27855843
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA27855824GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:26495879-26495898
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA26495879GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:24476754-24476773
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA24476754GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Malus domestica genome assembly, chromosome: 1.
OU696677.1:24546414-24546433
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA24546414GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Malus domestica genome assembly, chromosome: 1.
OU744542.1:28305935-28305954
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA28305935GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Malus domestica genome assembly, chromosome: 1.
OU744953.1:27770558-27770577
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA27770558GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Malus domestica genome assembly, chromosome: 1.
OU744991.1:24782378-24782397
CAGTTCAGCTGAGAGTGCGTTGGCCAGGGA24782378GGAGATGGTCGAAGGAGACACCCCTCTTGTCCCACCCAAATACCATTTCT
Crataegus laevigata genome assembly, chromosome: 10.
OY756947.1:32675865-32675884
CAACTCAGCCGAGAGAGTGTTGGCCAAGGA32675865GGAGATGGTCGAAGGAGACACCCCTCTCGTCCCTCCCAAATACCATTTCT
Pyrus communis genome assembly, chromosome: 5.
OY757072.1:25212618-25212637
CAACTCAGCCGAGAGAGCGTTGGCCAAGGA25212618GGAGATGGTCGAAGGAGACACCCCTCTCGTCCCTCCCAAATACCATTTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTCTCCTTCGACCATCTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTCTCCTTCGACCATCTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.216 | 1.207 | search_plus_done; http://172.18.8.135:50400/match?q=TGTCTCCTTCGACCATCTCC&k=0&no_gap=0&offset=0&limit=50
2.141 | 0.926 | search_minus_done; http://172.18.8.135:50400/match?q=GGAGATGGTCGAAGGAGACA&k=0&no_gap=0&offset=0&limit=26
2.155 | 0.014 | cgi_end;

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